RNA–Protein interactions for RNA: ENST00000363508.1

RNU5B-4P-201, Transcript of RNA, U5B small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5B-4P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-4P-201ENST00000363508 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
RNU5B-4P-201ENST00000363508 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
RNU5B-4P-201ENST00000363508 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
RNU5B-4P-201ENST00000363508 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
RNU5B-4P-201ENST00000363508 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
RNU5B-4P-201ENST00000363508 FOXD1Q16676 465 aa18.62■□□□□ 0.57
RNU5B-4P-201ENST00000363508 ADRA2BP18089 450 aa18.12■□□□□ 0.49
RNU5B-4P-201ENST00000363508 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
RNU5B-4P-201ENST00000363508 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
RNU5B-4P-201ENST00000363508 MSH5O43196 834 aa17.08■□□□□ 0.32
RNU5B-4P-201ENST00000363508 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
RNU5B-4P-201ENST00000363508 KCNA4P22459 653 aa16.81■□□□□ 0.28
RNU5B-4P-201ENST00000363508 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
RNU5B-4P-201ENST00000363508 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
RNU5B-4P-201ENST00000363508 CNKSR2Q8WXI2 1034 aa16.38■□□□□ 0.21
RNU5B-4P-201ENST00000363508 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
RNU5B-4P-201ENST00000363508 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
RNU5B-4P-201ENST00000363508 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
RNU5B-4P-201ENST00000363508 SLC4A1APQ9BWU0 796 aaKnown RBP16.06■□□□□ 0.16
RNU5B-4P-201ENST00000363508 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
RNU5B-4P-201ENST00000363508 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
RNU5B-4P-201ENST00000363508 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
RNU5B-4P-201ENST00000363508 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
RNU5B-4P-201ENST00000363508 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
RNU5B-4P-201ENST00000363508 ZBTB22O15209 634 aa15.46■□□□□ 0.07
RNU5B-4P-201ENST00000363508 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
RNU5B-4P-201ENST00000363508 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
RNU5B-4P-201ENST00000363508 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
RNU5B-4P-201ENST00000363508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
RNU5B-4P-201ENST00000363508 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
RNU5B-4P-201ENST00000363508 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
RNU5B-4P-201ENST00000363508 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
RNU5B-4P-201ENST00000363508 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
RNU5B-4P-201ENST00000363508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
RNU5B-4P-201ENST00000363508 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
RNU5B-4P-201ENST00000363508 SAMD1Q6SPF0 538 aaPredicted RBP14.77□□□□□ -0.05
RNU5B-4P-201ENST00000363508 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
RNU5B-4P-201ENST00000363508 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
RNU5B-4P-201ENST00000363508 APLP2Q06481 763 aa14.61□□□□□ -0.07
RNU5B-4P-201ENST00000363508 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
RNU5B-4P-201ENST00000363508 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
RNU5B-4P-201ENST00000363508 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
RNU5B-4P-201ENST00000363508 CAPN15O75808 1086 aa14.35□□□□□ -0.11
RNU5B-4P-201ENST00000363508 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
RNU5B-4P-201ENST00000363508 POLA2Q14181 598 aa14.17□□□□□ -0.14
RNU5B-4P-201ENST00000363508 ABCB7O75027 752 aa14.1□□□□□ -0.15
RNU5B-4P-201ENST00000363508 CACNB1Q02641 598 aaPredicted RBP14.09□□□□□ -0.15
RNU5B-4P-201ENST00000363508 FKBP8Q14318 412 aa14.09□□□□□ -0.15
RNU5B-4P-201ENST00000363508 DSG3P32926 999 aa14.03□□□□□ -0.16
RNU5B-4P-201ENST00000363508 FBLN2P98095 1184 aa14.02□□□□□ -0.17
RNU5B-4P-201ENST00000363508 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
RNU5B-4P-201ENST00000363508 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
RNU5B-4P-201ENST00000363508 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
RNU5B-4P-201ENST00000363508 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
RNU5B-4P-201ENST00000363508 PROM2Q8N271 834 aa13.62□□□□□ -0.23
RNU5B-4P-201ENST00000363508 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
RNU5B-4P-201ENST00000363508 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
RNU5B-4P-201ENST00000363508 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
RNU5B-4P-201ENST00000363508 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
RNU5B-4P-201ENST00000363508 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
RNU5B-4P-201ENST00000363508 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
RNU5B-4P-201ENST00000363508 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
RNU5B-4P-201ENST00000363508 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
RNU5B-4P-201ENST00000363508 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
RNU5B-4P-201ENST00000363508 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
RNU5B-4P-201ENST00000363508 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
RNU5B-4P-201ENST00000363508 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
RNU5B-4P-201ENST00000363508 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
RNU5B-4P-201ENST00000363508 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
RNU5B-4P-201ENST00000363508 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
RNU5B-4P-201ENST00000363508 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
RNU5B-4P-201ENST00000363508 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
RNU5B-4P-201ENST00000363508 MIER1Q8N108 512 aa13.09□□□□□ -0.31
RNU5B-4P-201ENST00000363508 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
RNU5B-4P-201ENST00000363508 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
RNU5B-4P-201ENST00000363508 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
RNU5B-4P-201ENST00000363508 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
RNU5B-4P-201ENST00000363508 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
RNU5B-4P-201ENST00000363508 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
RNU5B-4P-201ENST00000363508 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
RNU5B-4P-201ENST00000363508 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
RNU5B-4P-201ENST00000363508 PKD2Q13563 968 aa12.81□□□□□ -0.36
RNU5B-4P-201ENST00000363508 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
RNU5B-4P-201ENST00000363508 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
RNU5B-4P-201ENST00000363508 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
RNU5B-4P-201ENST00000363508 NUBP1P53384 320 aa12.71□□□□□ -0.37
RNU5B-4P-201ENST00000363508 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
RNU5B-4P-201ENST00000363508 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
RNU5B-4P-201ENST00000363508 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNU5B-4P-201ENST00000363508 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNU5B-4P-201ENST00000363508 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
RNU5B-4P-201ENST00000363508 GSE1Q14687 1217 aa12.66□□□□□ -0.38
RNU5B-4P-201ENST00000363508 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
RNU5B-4P-201ENST00000363508 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
RNU5B-4P-201ENST00000363508 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
RNU5B-4P-201ENST00000363508 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
RNU5B-4P-201ENST00000363508 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
RNU5B-4P-201ENST00000363508 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
RNU5B-4P-201ENST00000363508 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
RNU5B-4P-201ENST00000363508 RGL2O15211 777 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms