Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LRRC28Q86X40 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRRC28Q86X40 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 AP001541.1-201ENST00000623322 1904 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 MIR133A2-201ENST00000347538 102 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 PSMA6P1-201ENST00000400275 741 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 PRELID1P1-201ENST00000403549 660 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AL359885.1-201ENST00000415786 903 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AL354766.1-201ENST00000423396 542 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AL354707.3-201ENST00000427308 331 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC083862.1-201ENST00000427378 1242 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 GTF3AP6-201ENST00000432585 986 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 RN7SL568P-201ENST00000493069 298 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC117500.1-201ENST00000497352 755 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC135983.3-201ENST00000528049 1226 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 OR6M2P-201ENST00000529831 871 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 OR4A41P-201ENST00000533053 928 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 AC121758.1-202ENST00000556917 658 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 LINC01613-201ENST00000561476 2780 ntBASIC5.45□□□□□ -1.54
LRRC28Q86X40 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRRC28Q86X40 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LRRC28Q86X40 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL391419.1-201ENST00000398901 1275 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 BX276092.6-201ENST00000430476 250 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 ARMC4P1-201ENST00000438905 707 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 BX276092.8-201ENST00000455722 250 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 TRBV5-2-201ENST00000489095 273 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 RPS27P20-201ENST00000492051 246 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 RN7SL649P-201ENST00000496974 275 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 GUSBP9-201ENST00000510138 584 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 RN7SL230P-201ENST00000580835 303 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC026898.1-201ENST00000586404 571 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 NPIPB1P-202ENST00000588786 828 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL589765.6-201ENST00000601909 549 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL359091.2-201ENST00000609303 556 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms