Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN20P56880 AC090616.1-201ENST00000583895 447 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 AL589863.1-201ENST00000595383 631 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AC015799.1-201ENST00000622996 3122 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLDN20P56880 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLDN20P56880 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLDN20P56880 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 Z95114.1-201ENST00000624264 14574 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLDN20P56880 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 SNORD16-201ENST00000362803 99 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN20P56880 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLDN20P56880 RPL23AP17-201ENST00000401064 499 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 RN7SKP161-201ENST00000411110 305 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 MAPRE1P3-201ENST00000435438 796 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AC009237.1-201ENST00000442127 744 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AC007383.1-201ENST00000445875 636 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN20P56880 RN7SL741P-201ENST00000482473 289 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 COL6A4P2-205ENST00000509855 506 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.76□□□□□ -1.49
CLDN20P56880 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 IGHV1-14-201ENST00000523391 241 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 CYCSP25-201ENST00000525280 316 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.76□□□□□ -1.49
CLDN20P56880 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC023310.2-201ENST00000553844 547 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 AL133445.2-201ENST00000611191 527 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AP000720.1-201ENST00000625091 483 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 HPVC1-201ENST00000629899 1198 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 AL596275.2-207ENST00000641188 675 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 CASC19-246ENST00000641625 1606 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 MAPK10-287ENST00000641217 3037 ntBASIC5.76□□□□□ -1.49
CLDN20P56880 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN20P56880 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CLDN20P56880 AC011815.2-201ENST00000618230 2021 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AC140134.1-201ENST00000511830 3544 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLDN20P56880 GNG5P2-201ENST00000372054 207 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 MT-RNR1-201ENST00000389680 954 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 AL050335.1-201ENST00000396909 869 ntBASIC5.75□□□□□ -1.49
CLDN20P56880 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLDN20P56880 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.75□□□□□ -1.49
CLDN20P56880 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms