Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 PHF2P2-202ENST00000444553 2865 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 FRG1BP-201ENST00000278882 761 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC010132.2-201ENST00000295493 1043 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 FRG1CP-201ENST00000358464 769 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 SNORA30-201ENST00000384028 129 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AC003080.1-201ENST00000413552 767 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 TMSB10P1-201ENST00000415070 132 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 LINC01347-201ENST00000417964 355 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF144AP50876 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 AL049758.1-201ENST00000423154 397 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 MTCO1P54-201ENST00000430139 712 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 RPS10P2-201ENST00000430953 494 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 RPS28P8-201ENST00000435020 208 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 LSM3P3-201ENST00000436601 306 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 ARPC3P2-201ENST00000457786 533 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 RPS6P25-201ENST00000464444 748 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 RPL12P5-201ENST00000475149 392 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC100843.1-201ENST00000475372 550 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC117395.1-201ENST00000487390 403 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 ENPP7P10-201ENST00000504828 933 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC111000.3-201ENST00000508057 576 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 MTND6P25-201ENST00000528711 516 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 CBX3P5-201ENST00000552017 521 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AL109628.2-201ENST00000554037 201 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC009779.4-201ENST00000554248 611 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF144AP50876 AC090607.2-201ENST00000560331 695 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF144AP50876 MIR4266-201ENST00000583300 55 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF144AP50876 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AC016876.3-201ENST00000610459 426 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC013553.3-201ENST00000612943 615 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF144AP50876 AL356095.2-201ENST00000624025 457 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF144AP50876 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RNF144AP50876 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF144AP50876 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.53□□□□□ -1.2
RNF144AP50876 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF144AP50876 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF144AP50876 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF144AP50876 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.52□□□□□ -1.2
RNF144AP50876 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF144AP50876 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF144AP50876 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.52□□□□□ -1.2
RNF144AP50876 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF144AP50876 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF144AP50876 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF144AP50876 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF144AP50876 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF144AP50876 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF144AP50876 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
RNF144AP50876 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF144AP50876 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
RNF144AP50876 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
RNF144AP50876 AC079097.1-201ENST00000512187 1399 ntBASIC7.52□□□□□ -1.21
RNF144AP50876 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
RNF144AP50876 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms