Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC242843.1-201ENST00000618702 573 ntBASIC6.31□□□□□ -1.4
HTTP42858 CYP4F35P-202ENST00000636121 390 ntBASIC6.31□□□□□ -1.4
HTTP42858 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.31□□□□□ -1.4
HTTP42858 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HTTP42858 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.31□□□□□ -1.4
HTTP42858 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HTTP42858 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.31□□□□□ -1.4
HTTP42858 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.31□□□□□ -1.4
HTTP42858 AL161747.1-201ENST00000480068 358 ntBASIC6.31□□□□□ -1.4
HTTP42858 CCDC11P1-201ENST00000503137 1162 ntBASIC6.31□□□□□ -1.4
HTTP42858 AC034205.1-201ENST00000520621 638 ntBASIC6.31□□□□□ -1.4
HTTP42858 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.31□□□□□ -1.4
HTTP42858 PCNPP1-201ENST00000552501 511 ntBASIC6.31□□□□□ -1.4
HTTP42858 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC6.31□□□□□ -1.4
HTTP42858 ZNF658B-201ENST00000602828 3408 ntBASIC6.3□□□□□ -1.4
HTTP42858 RNA5SP479-201ENST00000364858 117 ntBASIC6.3□□□□□ -1.4
HTTP42858 NPM1P51-201ENST00000443470 744 ntBASIC6.3□□□□□ -1.4
HTTP42858 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 BTF3P13-201ENST00000513224 490 ntBASIC6.3□□□□□ -1.4
HTTP42858 AC134349.2-201ENST00000535136 910 ntBASIC6.3□□□□□ -1.4
HTTP42858 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 AL109618.2-201ENST00000605527 211 ntBASIC6.3□□□□□ -1.4
HTTP42858 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HTTP42858 OR2AM1P-201ENST00000422137 422 ntBASIC6.3□□□□□ -1.4
HTTP42858 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 AC010435.1-201ENST00000623353 1177 ntBASIC6.3□□□□□ -1.4
HTTP42858 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.3□□□□□ -1.4
HTTP42858 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 MGAT2P2-201ENST00000427194 797 ntBASIC6.3□□□□□ -1.4
HTTP42858 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 AC023141.8-201ENST00000442554 208 ntBASIC6.3□□□□□ -1.4
HTTP42858 AL035690.1-201ENST00000490892 383 ntBASIC6.3□□□□□ -1.4
HTTP42858 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.3□□□□□ -1.4
HTTP42858 RN7SKP147-201ENST00000517154 244 ntBASIC6.3□□□□□ -1.4
HTTP42858 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.3□□□□□ -1.4
HTTP42858 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HTTP42858 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.3□□□□□ -1.4
HTTP42858 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HTTP42858 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 AC022819.1-201ENST00000563495 3910 ntBASIC6.29□□□□□ -1.4
HTTP42858 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.29□□□□□ -1.4
HTTP42858 ABCA11P-202ENST00000504019 2110 ntBASIC6.29□□□□□ -1.4
HTTP42858 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.29□□□□□ -1.4
HTTP42858 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 AL354868.1-201ENST00000417077 482 ntBASIC6.29□□□□□ -1.4
HTTP42858 AC073264.2-201ENST00000448886 166 ntBASIC6.29□□□□□ -1.4
HTTP42858 AC078878.1-201ENST00000539832 958 ntBASIC6.29□□□□□ -1.4
HTTP42858 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.29□□□□□ -1.4
HTTP42858 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
HTTP42858 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HTTP42858 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HTTP42858 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.29□□□□□ -1.4
HTTP42858 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms