Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.9□□□□□ -0.98
SHANK2Q9UPX8 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SHANK2Q9UPX8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
SHANK2Q9UPX8 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SHANK2Q9UPX8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC126120.1-201ENST00000431082 470 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC079922.1-201ENST00000443291 359 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 RPL38P3-201ENST00000484463 213 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AL035690.1-201ENST00000490892 383 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC027334.1-201ENST00000603257 310 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 MIR193BHG-214ENST00000641765 509 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AL353763.1-201ENST00000624467 1628 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 RNA5SP234-201ENST00000363916 119 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 RN7SKP29-201ENST00000410957 272 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 FMO7P-201ENST00000436045 768 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC108161.1-201ENST00000461060 402 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 OR7E157P-201ENST00000494376 911 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 IGLV3-30-201ENST00000524362 298 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC091193.1-201ENST00000604640 448 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AL691477.1-201ENST00000624398 162 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 AC087565.3-203ENST00000641018 837 ntBASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
SHANK2Q9UPX8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 MAPK10-365ENST00000641902 3825 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL133270.1-201ENST00000402635 279 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL353626.3-201ENST00000413399 657 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL022331.1-201ENST00000429025 477 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL663074.2-201ENST00000440621 479 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL022319.1-201ENST00000458183 1167 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AC022215.1-201ENST00000481770 362 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 FO393422.1-201ENST00000603908 708 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 MIR6810-201ENST00000622701 70 ntBASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SHANK2Q9UPX8 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms