Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FDPSP1-201ENST00000424976 1071 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC245291.3-201ENST00000443400 292 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 HMGB1P48-201ENST00000446155 598 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 OR52I1-201ENST00000450052 1050 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 PMS2P11-201ENST00000451831 574 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC021146.7-201ENST00000509604 775 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 GUSBP9-201ENST00000510138 584 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 OR5M6P-201ENST00000530227 937 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 MIR4470-201ENST00000583453 72 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 U73023.1-201ENST00000603134 700 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AL583832.1-201ENST00000603227 784 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 MIR6862-1-201ENST00000613016 70 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 MIR6862-2-201ENST00000614755 70 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 AC008443.7-201ENST00000622195 246 ntBASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
ZC3H4Q9UPT8 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 AC095038.1-201ENST00000429248 1591 ntBASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
ZC3H4Q9UPT8 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 Y_RNA.88-201ENST00000363029 99 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RNA5SP382-201ENST00000363355 112 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP55-201ENST00000364888 307 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 Y_RNA.359-201ENST00000365498 102 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MTCO1P56-201ENST00000401674 224 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL031577.2-201ENST00000404133 280 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL079341.1-201ENST00000404701 1207 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MIR1275-201ENST00000408770 80 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RNU2-17P-201ENST00000410290 190 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP142-201ENST00000411236 328 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MTND1P21-201ENST00000412991 285 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RPS7P9-201ENST00000414704 586 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC016769.2-201ENST00000414815 475 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MTCYBP38-201ENST00000417160 1123 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 EEF1GP7-201ENST00000422983 703 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 KCTD9P1-201ENST00000430462 1167 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 TPMTP4-201ENST00000450749 678 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 CFTRP1-201ENST00000456646 183 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RPS6P4-201ENST00000494693 758 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC109458.1-201ENST00000508858 316 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ST13P12-201ENST00000508958 1094 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 CR383658.1-201ENST00000514609 734 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 SEPT10P1-201ENST00000517342 1162 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 DUXAP2-201ENST00000519198 589 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC009729.1-201ENST00000548873 1133 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL445383.1-201ENST00000554689 874 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 MIR4428-201ENST00000584884 73 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC012254.4-201ENST00000588843 273 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 RPSAP66-201ENST00000592196 606 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 AC026368.1-201ENST00000614934 690 ntBASIC8.89□□□□□ -0.99
ZC3H4Q9UPT8 uc_338.29-201ENST00000615099 168 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms