Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 ZNF402P-201ENST00000404435 3100 ntBASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KIAA1549Q9HCM3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 CASC19-238ENST00000641523 1558 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AL132875.1-201ENST00000403623 949 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RPL12P12-201ENST00000424633 501 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 BX323845.3-201ENST00000428215 527 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 CFL1P4-201ENST00000451536 498 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RN7SKP77-201ENST00000363261 353 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RNA5SP156-201ENST00000410250 110 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 KIF4CP-201ENST00000422742 1279 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 RPL12P48-201ENST00000605620 304 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AL645933.2-201ENST00000606743 1207 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 AL357562.1-201ENST00000624911 609 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 MAPK10-261ENST00000641050 3109 ntBASIC5.42□□□□□ -1.54
KIAA1549Q9HCM3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AL021877.2-201ENST00000624442 10684 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AC087752.1-201ENST00000391360 558 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 MTND6P12-201ENST00000428247 522 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AL391987.1-201ENST00000441025 200 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AC110749.1-201ENST00000462007 357 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 AC141002.1-201ENST00000607025 279 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
KIAA1549Q9HCM3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms