Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC015983.1-201ENST00000441577 373 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 RN7SL57P-201ENST00000493687 290 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 BLZF2P-201ENST00000553776 1130 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 MAPK10-350ENST00000641777 965 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 AC012313.8-201ENST00000595059 5402 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS13CQ709C8 CASC19-281ENST00000642118 1554 ntBASIC4.71□□□□□ -1.66
VPS13CQ709C8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
VPS13CQ709C8 RNA5SP350-201ENST00000363298 111 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 P2RY10P2-201ENST00000416730 913 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AL035690.1-201ENST00000490892 383 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 OR4A42P-201ENST00000531397 938 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC069307.1-201ENST00000602820 447 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC091953.3-201ENST00000623220 236 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 MIR7641-1-201ENST00000627518 61 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 USP9YP3-201ENST00000434481 1766 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 CASC19-221ENST00000641309 1382 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC104162.1-201ENST00000430831 2382 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 SNURFL-201ENST00000309296 343 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AP000676.2-201ENST00000529711 301 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC012254.5-201ENST00000623573 478 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 DSTNP5-201ENST00000427921 523 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 CYCSP6-201ENST00000434498 302 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 AL161722.1-201ENST00000446972 1032 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AC093799.2-201ENST00000610062 578 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 AP004289.1-201ENST00000436307 2205 ntBASIC4.7□□□□□ -1.66
VPS13CQ709C8 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 SYT17-202ENST00000562034 5092 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS13CQ709C8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS13CQ709C8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RN7SL385P-201ENST00000468873 276 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 CCDC11P1-201ENST00000503137 1162 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 MIR130A-201ENST00000385274 89 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms