Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC007365.2-201ENST00000428806 458 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 MTND3P21-201ENST00000433774 331 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC000041.1-201ENST00000439655 175 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC023271.1-201ENST00000445936 1090 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC068135.1-201ENST00000446164 246 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 DSTNP2-201ENST00000504533 515 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 SCARNA6-201ENST00000515982 265 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RPL10P18-201ENST00000519384 309 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RPL41P2-201ENST00000544920 409 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 EIF4A2P1-201ENST00000587313 1063 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC015802.2-201ENST00000589690 189 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AP000942.4-201ENST00000604811 241 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AL390877.1-201ENST00000605704 214 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 AC090186.1-201ENST00000605991 572 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 FRG1DP-201ENST00000635586 771 ntBASIC9.08□□□□□ -0.96
RC3H1Q5TC82 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RC3H1Q5TC82 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC078795.1-201ENST00000602342 3143 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 FANCD2P2-201ENST00000437591 1400 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AL354685.2-201ENST00000448218 1447 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC090229.1-201ENST00000590983 1609 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RN7SKP107-201ENST00000364157 290 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RNU6-481P-201ENST00000384194 107 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 SNORA68-201ENST00000384437 133 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AL603650.1-201ENST00000412680 240 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 NPM1P4-201ENST00000414095 812 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RPL7P53-201ENST00000421245 739 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 BX119904.1-201ENST00000432026 348 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 B3GNT2P1-201ENST00000434960 952 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 NANOGP2-201ENST00000435391 727 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 UBE2V1P8-201ENST00000437166 265 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AL121578.2-201ENST00000448797 447 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 CCNJP1-201ENST00000450600 1149 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 PTMAP1-205ENST00000455552 325 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 CFTRP1-201ENST00000456646 183 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RPL29P23-201ENST00000486188 442 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 IGHVII-60-1-201ENST00000519079 256 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 OR7E154P-201ENST00000525174 932 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 SETP17-201ENST00000534163 817 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC121758.1-202ENST00000556917 658 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC026458.1-201ENST00000564330 438 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 PPIAP14-201ENST00000577627 496 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AL138478.1-201ENST00000612252 832 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC023632.6-201ENST00000624338 2177 ntBASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 MELK-208ENST00000536987 2125 ntTSL 2 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC9.07□□□□□ -0.96
RC3H1Q5TC82 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms