Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.84□□□□□ -1.48
HMGCS1Q01581 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMGCS1Q01581 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.84□□□□□ -1.48
HMGCS1Q01581 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 RPSAP32-201ENST00000432681 526 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 RPS3AP38-201ENST00000435889 763 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 OR3D1P-201ENST00000438288 955 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 H3F3AP5-201ENST00000475267 429 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC090958.1-201ENST00000511122 351 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 RNA5SP434-201ENST00000516647 121 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 OR4A41P-201ENST00000533053 928 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC244502.2-201ENST00000543361 851 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC121758.1-202ENST00000556917 658 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 SETP3-201ENST00000581726 813 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AP001823.1-201ENST00000604056 1003 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMGCS1Q01581 AC022325.1-201ENST00000502748 2199 ntBASIC5.83□□□□□ -1.48
HMGCS1Q01581 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMGCS1Q01581 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 AL096829.1-201ENST00000413677 457 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 RPS15AP30-201ENST00000420976 390 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 AL590004.3-202ENST00000445883 451 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 ACA64.4-201ENST00000459070 127 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 RPL23AP40-201ENST00000487630 390 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 RPS27P20-201ENST00000492051 246 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 CCDC11P1-201ENST00000503137 1162 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 SNX18P25-201ENST00000510539 758 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 ZNF519P4-201ENST00000514008 125 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 RN7SL230P-201ENST00000580835 303 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 AP005136.2-201ENST00000583253 1049 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 uc_338.26-201ENST00000612659 160 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 uc_338.29-201ENST00000615099 168 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HMGCS1Q01581 CCAT2-201ENST00000630920 1752 ntBASIC5.82□□□□□ -1.48
HMGCS1Q01581 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HMGCS1Q01581 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL161756.3-201ENST00000641216 2071 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.81□□□□□ -1.48
HMGCS1Q01581 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGCS1Q01581 SNORD1C-201ENST00000363315 78 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 RNU105B-201ENST00000364478 208 ntBASIC5.81□□□□□ -1.48
HMGCS1Q01581 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms