Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HSPG2P98160 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC3.55□□□□□ -1.84
HSPG2P98160 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HSPG2P98160 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HSPG2P98160 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HSPG2P98160 AC105114.1-201ENST00000624795 1862 ntBASIC3.55□□□□□ -1.84
HSPG2P98160 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 AL133388.1-201ENST00000404509 287 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.54□□□□□ -1.84
HSPG2P98160 RSL24D1P6-201ENST00000426934 401 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 PTTG3P-201ENST00000521862 606 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC008033.2-201ENST00000542626 177 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 RMST-210ENST00000640149 2844 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HSPG2P98160 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 RPL17P50-201ENST00000396131 546 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 CYP4F32P-201ENST00000426492 504 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AL161747.1-201ENST00000480068 358 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC008629.2-201ENST00000503783 483 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC010343.2-201ENST00000510162 224 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 RN7SKP122-201ENST00000515923 296 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC139365.2-201ENST00000517972 253 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HSPG2P98160 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 MIPEPP2-201ENST00000422560 1819 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 Z98755.1-201ENST00000407015 1384 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 GREB1L-201ENST00000269218 5600 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HSPG2P98160 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HSPG2P98160 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 AL591848.1-201ENST00000413092 322 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 AL138878.2-201ENST00000440581 1241 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 RN7SL447P-201ENST00000494711 245 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 TOMM20P2-201ENST00000540082 421 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 RBM22P12-201ENST00000567098 1255 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC025574.2-201ENST00000615621 514 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AL161637.1-201ENST00000622380 412 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 AC022905.1-201ENST00000503430 3048 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HSPG2P98160 AC004690.1-201ENST00000418216 328 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC002075.1-201ENST00000457396 676 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 HPRT1P1-201ENST00000509498 657 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.54□□□□□ -1.84
HSPG2P98160 OR5AN2P-201ENST00000534535 896 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 354 ms