Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
POLR2AP24928 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
POLR2AP24928 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.1□□□□□ -1.27
POLR2AP24928 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 SNORA70-201ENST00000384436 135 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.09□□□□□ -1.27
POLR2AP24928 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.09□□□□□ -1.27
POLR2AP24928 RBMY2KP-201ENST00000418221 992 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.09□□□□□ -1.27
POLR2AP24928 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC7.09□□□□□ -1.27
POLR2AP24928 AP005639.1-201ENST00000526939 192 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.09□□□□□ -1.27
POLR2AP24928 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.09□□□□□ -1.27
POLR2AP24928 AC090079.2-201ENST00000575289 768 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 AP002884.5-201ENST00000595053 1132 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.09□□□□□ -1.27
POLR2AP24928 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC7.09□□□□□ -1.27
POLR2AP24928 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.09□□□□□ -1.27
POLR2AP24928 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
POLR2AP24928 HDAC1P2-201ENST00000453661 1398 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
POLR2AP24928 AC083799.1-201ENST00000366451 910 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
POLR2AP24928 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 AL022331.1-201ENST00000429025 477 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.09□□□□□ -1.27
POLR2AP24928 Z80107.2-201ENST00000445127 392 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.09□□□□□ -1.27
POLR2AP24928 RPS3AP15-201ENST00000483874 781 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.09□□□□□ -1.27
POLR2AP24928 AC004825.1-201ENST00000555068 586 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 AC044860.2-201ENST00000561005 179 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 AC016911.1-201ENST00000613297 452 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 MIR193BHG-214ENST00000641765 509 ntBASIC7.09□□□□□ -1.27
POLR2AP24928 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
POLR2AP24928 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
POLR2AP24928 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
POLR2AP24928 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
POLR2AP24928 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
POLR2AP24928 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.08□□□□□ -1.28
POLR2AP24928 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 AC244453.4-201ENST00000419150 388 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AC113412.1-201ENST00000425840 504 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AC009784.1-201ENST00000426484 460 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.08□□□□□ -1.28
POLR2AP24928 YWHABP1-201ENST00000445359 727 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 RN7SL172P-201ENST00000460535 303 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 RPL32P33-201ENST00000487023 394 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 OR7E157P-201ENST00000494376 911 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.08□□□□□ -1.28
POLR2AP24928 AP001496.3-201ENST00000580230 913 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 OR7A11P-201ENST00000597719 953 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC007842.1-201ENST00000597336 2039 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AC009120.2-204ENST00000621548 2032 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
POLR2AP24928 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC114786.1-201ENST00000512892 1415 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.08□□□□□ -1.28
POLR2AP24928 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 TNPO1P1-201ENST00000423641 1138 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.08□□□□□ -1.28
POLR2AP24928 RPS4XP1-201ENST00000482189 787 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AC008629.2-201ENST00000503783 483 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 AP002981.1-201ENST00000517692 975 ntBASIC7.08□□□□□ -1.28
POLR2AP24928 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.08□□□□□ -1.28
POLR2AP24928 AC087783.2-201ENST00000605070 562 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms