Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 RNA5SP92-201ENST00000516437 110 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 OR10G5P-201ENST00000532733 358 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PDGFBP01127 SNORA70D-201ENST00000578836 135 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 MIR4776-2-201ENST00000580204 80 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 MIR4505-201ENST00000582238 73 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 CASC19-222ENST00000641321 1173 ntBASIC6.31□□□□□ -1.4
PDGFBP01127 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFBP01127 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFBP01127 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFBP01127 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFBP01127 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 AL590763.1-201ENST00000398297 1545 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 MRRFP1-201ENST00000435941 1675 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PDGFBP01127 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 SNORA64.1-201ENST00000362600 132 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 RPL34P3-201ENST00000421454 338 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 CFL1P1-202ENST00000432948 411 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 CDK7P1-201ENST00000434574 693 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 PPIAP10-201ENST00000438675 458 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFBP01127 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFBP01127 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 RN7SL727P-201ENST00000482164 296 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AC004815.1-201ENST00000484185 331 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.3□□□□□ -1.4
PDGFBP01127 RNU6-1334P-201ENST00000516032 105 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 PCNAP4-201ENST00000532690 730 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AP001858.2-201ENST00000536213 601 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
PDGFBP01127 AC091078.2-201ENST00000557145 559 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFBP01127 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 AL445670.1-201ENST00000618889 801 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AC130456.6-201ENST00000623745 765 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 AC027348.2-201ENST00000624375 642 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFBP01127 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDGFBP01127 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.3□□□□□ -1.4
PDGFBP01127 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.3□□□□□ -1.4
PDGFBP01127 CASC19-228ENST00000641414 1684 ntBASIC6.3□□□□□ -1.4
PDGFBP01127 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFBP01127 AC103591.2-201ENST00000265259 766 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PDGFBP01127 GAPDHP24-201ENST00000328713 983 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.29□□□□□ -1.4
PDGFBP01127 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 RN7SKP59-201ENST00000410520 314 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFBP01127 COPS8P2-201ENST00000473228 627 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 RN7SL184P-201ENST00000488308 297 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms