Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.78□□□□□ -1.48
SCN2BO60939 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN2BO60939 OR4G1P-202ENST00000641173 1788 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 AC093297.3-201ENST00000607056 2517 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN2BO60939 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
SCN2BO60939 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN2BO60939 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SCN2BO60939 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN2BO60939 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 RAB28P2-201ENST00000454299 641 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC036111.2-201ENST00000533247 901 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 AC124891.1-201ENST00000536322 519 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN2BO60939 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.78□□□□□ -1.48
SCN2BO60939 MIR3157-201ENST00000578688 85 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 AC119403.2-201ENST00000590960 598 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 AP001267.4-201ENST00000602598 545 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC093388.1-201ENST00000609166 430 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.78□□□□□ -1.48
SCN2BO60939 MIR6885-201ENST00000612241 66 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 ICE2P1-201ENST00000512800 1849 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SCN2BO60939 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
SCN2BO60939 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SCN2BO60939 AC092070.2-203ENST00000598377 3644 ntBASIC5.78□□□□□ -1.48
SCN2BO60939 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.77□□□□□ -1.48
SCN2BO60939 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
SCN2BO60939 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.77□□□□□ -1.48
SCN2BO60939 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SCN2BO60939 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 SNORD1C-201ENST00000363315 78 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 RNA5SP77-201ENST00000365394 120 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 MTND2P12-201ENST00000417560 1252 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN2BO60939 CXCR2P1-202ENST00000443392 1074 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 AC092601.1-201ENST00000444526 383 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN2BO60939 RPL34P33-201ENST00000486062 334 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN2BO60939 MRPL57P6-201ENST00000506570 309 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.77□□□□□ -1.49
SCN2BO60939 CYCSP25-201ENST00000525280 316 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN2BO60939 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.77□□□□□ -1.49
SCN2BO60939 AL355974.3-201ENST00000617383 467 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 AC007603.3-201ENST00000636915 979 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 AC018717.1-201ENST00000457712 1505 ntBASIC5.77□□□□□ -1.49
SCN2BO60939 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.77□□□□□ -1.49
SCN2BO60939 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SCN2BO60939 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SCN2BO60939 XKRY2-202ENST00000623874 1581 ntBASIC5.76□□□□□ -1.49
SCN2BO60939 XKRY-202ENST00000624960 1581 ntBASIC5.76□□□□□ -1.49
SCN2BO60939 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCN2BO60939 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms