Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RNU1-106P-201ENST00000384382 164 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 CHODL-206ENST00000400135 2136 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RN7SKP27-201ENST00000410684 333 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 GABARAPL3-201ENST00000412799 354 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 NME1P1-201ENST00000420914 382 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 GSTA6P-201ENST00000424144 582 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC134698.5-201ENST00000519444 336 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 TOMM20P2-201ENST00000540082 421 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC009704.2-201ENST00000618739 483 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC091953.3-201ENST00000623220 236 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AL357562.1-201ENST00000624911 609 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC089998.1-201ENST00000548575 3141 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 RNA5SP183-201ENST00000362452 119 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC006466.1-201ENST00000438721 289 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AP000676.2-201ENST00000529711 301 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ZSWIM5P3-201ENST00000511265 2743 ntBASIC5.93□□□□□ -1.46
RIF1Q5UIP0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RIF1Q5UIP0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 RPL36P18-201ENST00000419316 318 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC147055.3-201ENST00000510547 851 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC022832.1-201ENST00000530718 645 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AL645933.2-201ENST00000606743 1207 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC009163.6-201ENST00000612367 342 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC112255.1-201ENST00000624070 2493 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC127070.3-201ENST00000503695 3263 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AP001858.2-201ENST00000536213 601 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 SUGT1P3-202ENST00000604259 383 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 AC068831.8-201ENST00000620171 435 ntBASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.92□□□□□ -1.46
RIF1Q5UIP0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms