Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 AC106872.5-201ENST00000508856 1416 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGA1P17096 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 WDR95P-201ENST00000425638 1542 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC016583.1-201ENST00000624221 2431 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HMGA1P17096 OR7E101P-201ENST00000400428 513 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC007562.1-201ENST00000421819 517 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGA1P17096 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGA1P17096 RPS7P3-201ENST00000443360 580 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 AC023274.2-201ENST00000445264 521 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC018638.3-201ENST00000461273 132 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 AC008629.2-201ENST00000503783 483 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 AC106872.4-201ENST00000510050 523 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 TPM3P3-201ENST00000521343 354 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC079600.1-201ENST00000550326 297 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGA1P17096 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC009237.12-201ENST00000604755 742 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGA1P17096 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGA1P17096 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGA1P17096 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGA1P17096 AL391262.1-201ENST00000556558 1992 ntBASIC6.26□□□□□ -1.41
HMGA1P17096 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGA1P17096 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGA1P17096 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
HMGA1P17096 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGA1P17096 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGA1P17096 RPS3AP2-201ENST00000407190 754 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 AL445928.1-201ENST00000435545 222 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HMGA1P17096 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGA1P17096 SUMO2P3-201ENST00000438311 288 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGA1P17096 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGA1P17096 SDC4P-201ENST00000453285 601 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGA1P17096 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.25□□□□□ -1.41
HMGA1P17096 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.25□□□□□ -1.41
HMGA1P17096 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
HMGA1P17096 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 NEPNP-201ENST00000404786 1371 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HMGA1P17096 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 OR52B5P-204ENST00000641744 3467 ntBASIC6.25□□□□□ -1.41
HMGA1P17096 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HMGA1P17096 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HMGA1P17096 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGA1P17096 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGA1P17096 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
HMGA1P17096 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGA1P17096 FUNDC2P3-201ENST00000334716 533 ntBASIC6.24□□□□□ -1.41
HMGA1P17096 SNORD8-201ENST00000363915 110 ntBASIC6.24□□□□□ -1.41
HMGA1P17096 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGA1P17096 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGA1P17096 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGA1P17096 AP000281.1-201ENST00000444036 316 ntBASIC6.24□□□□□ -1.41
HMGA1P17096 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms