Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 LINC00556-201ENST00000569603 412 ntBASIC4.86□□□□□ -1.63
CD28P10747 OR7A11P-201ENST00000597719 953 ntBASIC4.86□□□□□ -1.63
CD28P10747 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.86□□□□□ -1.63
CD28P10747 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AL512356.3-201ENST00000623005 461 ntBASIC4.86□□□□□ -1.63
CD28P10747 AC129778.1-202ENST00000623812 261 ntBASIC4.86□□□□□ -1.63
CD28P10747 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AL591379.1-207ENST00000635982 261 ntBASIC4.86□□□□□ -1.63
CD28P10747 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.86□□□□□ -1.63
CD28P10747 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC4.86□□□□□ -1.63
CD28P10747 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.86□□□□□ -1.63
CD28P10747 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 USP46-202ENST00000451218 4622 ntTSL 5 BASIC4.86□□□□□ -1.63
CD28P10747 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 AC091305.2-201ENST00000624049 1576 ntBASIC4.86□□□□□ -1.63
CD28P10747 AP002370.1-201ENST00000528055 1602 ntBASIC4.86□□□□□ -1.63
CD28P10747 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD28P10747 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC4.85□□□□□ -1.63
CD28P10747 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 OR7E25P-201ENST00000344844 931 ntBASIC4.85□□□□□ -1.63
CD28P10747 SNORA21-201ENST00000362423 132 ntBASIC4.85□□□□□ -1.63
CD28P10747 RNU1-49P-201ENST00000363468 159 ntBASIC4.85□□□□□ -1.63
CD28P10747 AL050335.1-201ENST00000396909 869 ntBASIC4.85□□□□□ -1.63
CD28P10747 RNA5SP156-201ENST00000410250 110 ntBASIC4.85□□□□□ -1.63
CD28P10747 SLC20A1P1-201ENST00000413906 956 ntBASIC4.85□□□□□ -1.63
CD28P10747 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AL359839.1-201ENST00000451975 1160 ntBASIC4.85□□□□□ -1.63
CD28P10747 VPS25P1-201ENST00000455691 508 ntBASIC4.85□□□□□ -1.63
CD28P10747 CST12P-201ENST00000457644 362 ntBASIC4.85□□□□□ -1.63
CD28P10747 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 ACA64.1-201ENST00000459171 127 ntBASIC4.85□□□□□ -1.63
CD28P10747 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 RPL7P51-201ENST00000490532 749 ntBASIC4.85□□□□□ -1.63
CD28P10747 CR383658.1-201ENST00000514609 734 ntBASIC4.85□□□□□ -1.63
CD28P10747 AC060775.1-201ENST00000518241 520 ntBASIC4.85□□□□□ -1.63
CD28P10747 AP003396.4-201ENST00000527574 265 ntBASIC4.85□□□□□ -1.63
CD28P10747 AP000662.1-201ENST00000530952 487 ntBASIC4.85□□□□□ -1.63
CD28P10747 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 MIR3614-201ENST00000581261 86 ntBASIC4.85□□□□□ -1.63
CD28P10747 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 AC068768.2-201ENST00000602352 343 ntBASIC4.85□□□□□ -1.63
CD28P10747 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.85□□□□□ -1.63
CD28P10747 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.85□□□□□ -1.63
CD28P10747 AC129915.3-201ENST00000634128 948 ntBASIC4.85□□□□□ -1.63
CD28P10747 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 CASC19-238ENST00000641523 1558 ntBASIC4.85□□□□□ -1.63
CD28P10747 AC093829.1-201ENST00000506662 1618 ntBASIC4.85□□□□□ -1.63
CD28P10747 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.85□□□□□ -1.63
CD28P10747 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD28P10747 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 AL591135.1-201ENST00000401578 5914 ntBASIC4.85□□□□□ -1.63
CD28P10747 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CD28P10747 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD28P10747 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms