Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.98□□□□□ -1.45
TNFP01375 AC100767.2-201ENST00000604840 693 ntBASIC5.98□□□□□ -1.45
TNFP01375 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 MIR6793-201ENST00000612376 63 ntBASIC5.98□□□□□ -1.45
TNFP01375 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TNFP01375 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
TNFP01375 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 AL591135.1-201ENST00000401578 5914 ntBASIC5.98□□□□□ -1.45
TNFP01375 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 AF287957.1-201ENST00000607368 1595 ntBASIC5.97□□□□□ -1.45
TNFP01375 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 HDAC1P2-201ENST00000453661 1398 ntBASIC5.97□□□□□ -1.45
TNFP01375 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
TNFP01375 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TNFP01375 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.97□□□□□ -1.45
TNFP01375 NPM1P36-201ENST00000415681 835 ntBASIC5.97□□□□□ -1.45
TNFP01375 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.97□□□□□ -1.45
TNFP01375 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.97□□□□□ -1.45
TNFP01375 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.97□□□□□ -1.45
TNFP01375 AC009237.1-201ENST00000442127 744 ntBASIC5.97□□□□□ -1.45
TNFP01375 AL355355.1-201ENST00000442900 793 ntBASIC5.97□□□□□ -1.45
TNFP01375 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.97□□□□□ -1.45
TNFP01375 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.97□□□□□ -1.45
TNFP01375 AC087360.1-201ENST00000518788 616 ntBASIC5.97□□□□□ -1.45
TNFP01375 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.97□□□□□ -1.45
TNFP01375 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TNFP01375 AC068305.2-201ENST00000550567 1205 ntBASIC5.97□□□□□ -1.45
TNFP01375 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 AC092121.1-201ENST00000569452 202 ntBASIC5.97□□□□□ -1.45
TNFP01375 AC024589.2-201ENST00000605642 1294 ntBASIC5.97□□□□□ -1.45
TNFP01375 AL357562.1-201ENST00000624911 609 ntBASIC5.97□□□□□ -1.45
TNFP01375 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.97□□□□□ -1.45
TNFP01375 AC003992.1-201ENST00000635364 557 ntBASIC5.97□□□□□ -1.45
TNFP01375 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.97□□□□□ -1.45
TNFP01375 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 CDY5P-201ENST00000411487 1580 ntBASIC5.97□□□□□ -1.45
TNFP01375 CDY9P-201ENST00000451397 1580 ntBASIC5.97□□□□□ -1.45
TNFP01375 CCNT2P1-201ENST00000423082 1315 ntBASIC5.97□□□□□ -1.45
TNFP01375 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TNFP01375 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TNFP01375 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
TNFP01375 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TNFP01375 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TNFP01375 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TNFP01375 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.96□□□□□ -1.45
TNFP01375 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
TNFP01375 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 CASC19-243ENST00000641588 1546 ntBASIC5.96□□□□□ -1.46
TNFP01375 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TNFP01375 AC096921.2-201ENST00000561507 1916 ntBASIC5.96□□□□□ -1.46
TNFP01375 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TNFP01375 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TNFP01375 MIR323B-201ENST00000385269 82 ntBASIC5.96□□□□□ -1.46
TNFP01375 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 VN1R110P-201ENST00000438988 971 ntBASIC5.96□□□□□ -1.46
TNFP01375 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.96□□□□□ -1.46
TNFP01375 AL022237.1-201ENST00000446663 358 ntBASIC5.96□□□□□ -1.46
TNFP01375 RPL23AP60-201ENST00000450011 454 ntBASIC5.96□□□□□ -1.46
TNFP01375 RPL7P51-201ENST00000490532 749 ntBASIC5.96□□□□□ -1.46
TNFP01375 AC104109.1-201ENST00000498563 436 ntBASIC5.96□□□□□ -1.46
TNFP01375 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.96□□□□□ -1.46
TNFP01375 AC114781.3-201ENST00000512083 142 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms