Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXA2O43364 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXA2O43364 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXA2O43364 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXA2O43364 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXA2O43364 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.56□□□□□ -1.04
HOXA2O43364 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 AC005538.2-201ENST00000623215 1864 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 MAPK10-371ENST00000641952 5209 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HOXA2O43364 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HOXA2O43364 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 SNORA10-201ENST00000384084 133 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC007066.1-201ENST00000392902 381 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 ATP5HP3-201ENST00000396994 486 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AL353151.1-201ENST00000402406 604 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AL358942.1-201ENST00000418595 1178 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 GRPEL2P2-201ENST00000421856 670 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 AL050321.1-201ENST00000432363 400 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 RN7SL308P-201ENST00000464971 297 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 HMGN1P12-201ENST00000499125 195 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC114786.4-201ENST00000508771 728 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 CYP4F27P-201ENST00000514557 494 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 IGHV7-40-201ENST00000520963 296 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8.55□□□□□ -1.04
HOXA2O43364 AC022832.1-201ENST00000530718 645 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 MT1L-202ENST00000566367 78 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC8.55□□□□□ -1.04
HOXA2O43364 MIR4666A-201ENST00000580160 79 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXA2O43364 AC022432.1-201ENST00000595739 310 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 U1.22-201ENST00000605806 164 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 Y_RNA.812-201ENST00000610788 101 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AL592295.2-201ENST00000612578 206 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 Y_RNA.784-201ENST00000613803 101 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 Y_RNA.787-201ENST00000616522 101 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 Y_RNA.780-201ENST00000617336 101 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AL445670.1-201ENST00000618889 801 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 Y_RNA.801-201ENST00000619005 101 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.55□□□□□ -1.04
HOXA2O43364 AL353898.2-201ENST00000623000 255 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 Z99496.1-201ENST00000469424 1477 ntBASIC8.55□□□□□ -1.04
HOXA2O43364 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXA2O43364 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXA2O43364 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
HOXA2O43364 QRSL1P1-201ENST00000400977 1540 ntBASIC8.54□□□□□ -1.04
HOXA2O43364 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.54□□□□□ -1.04
HOXA2O43364 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.54□□□□□ -1.04
HOXA2O43364 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HOXA2O43364 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.54□□□□□ -1.04
HOXA2O43364 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms