Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 AC098818.2-201ENST00000564925 2320 ntBASIC22.54■■□□□ 1.2
CLIC4Q9Y696 AC018553.1-201ENST00000616682 1458 ntBASIC22.54■■□□□ 1.2
CLIC4Q9Y696 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 Z82202.1-201ENST00000623446 1880 ntBASIC22.54■■□□□ 1.2
CLIC4Q9Y696 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.54■■□□□ 1.2
CLIC4Q9Y696 DUSP5P2-201ENST00000426873 1033 ntBASIC22.54■■□□□ 1.2
CLIC4Q9Y696 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.54■■□□□ 1.2
CLIC4Q9Y696 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.53■■□□□ 1.2
CLIC4Q9Y696 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLIC4Q9Y696 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLIC4Q9Y696 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CLIC4Q9Y696 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.52■■□□□ 1.19
CLIC4Q9Y696 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 NCF1B-203ENST00000435988 1254 ntBASIC22.51■■□□□ 1.19
CLIC4Q9Y696 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLIC4Q9Y696 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 TSPY6P-201ENST00000448518 926 ntBASIC22.5■■□□□ 1.19
CLIC4Q9Y696 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 AC018445.3-201ENST00000624177 1945 ntBASIC22.5■■□□□ 1.19
CLIC4Q9Y696 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLIC4Q9Y696 AC116351.2-201ENST00000606540 1585 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms