Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HS3ST3A1Q9Y663 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
HS3ST3A1Q9Y663 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.42■□□□□ 0.7
HS3ST3A1Q9Y663 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.42■□□□□ 0.7
HS3ST3A1Q9Y663 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.42■□□□□ 0.7
HS3ST3A1Q9Y663 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 AC020907.5-201ENST00000624372 1936 ntBASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 KRT18P21-201ENST00000515767 1272 ntBASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 AC145285.6-201ENST00000604632 637 ntBASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.41■□□□□ 0.7
HS3ST3A1Q9Y663 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 AC004980.1-204ENST00000429707 299 ntBASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 MIR6786-201ENST00000616843 113 ntBASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 TMEM179-206ENST00000616017 1645 ntBASIC19.4■□□□□ 0.7
HS3ST3A1Q9Y663 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.39■□□□□ 0.7
HS3ST3A1Q9Y663 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.39■□□□□ 0.7
HS3ST3A1Q9Y663 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HS3ST3A1Q9Y663 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 MESTP1-201ENST00000404287 994 ntBASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 AP001271.2-201ENST00000624018 1556 ntBASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.39■□□□□ 0.69
HS3ST3A1Q9Y663 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 RCN1P1-201ENST00000400413 996 ntBASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 MIR1224-201ENST00000408193 85 ntBASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 B3GAT3P1-201ENST00000471720 806 ntBASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 KRT8P9-201ENST00000558927 1449 ntBASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 NAPSB-206ENST00000562112 1266 ntBASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.38■□□□□ 0.69
HS3ST3A1Q9Y663 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HS3ST3A1Q9Y663 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms