Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC00588Q9Y4M8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 AP005212.1-201ENST00000581547 1997 ntBASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 FAM197Y1-201ENST00000421178 764 ntBASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 CD177P1-201ENST00000606252 935 ntBASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 AC073195.1-201ENST00000607241 877 ntBASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 FEM1AP1-201ENST00000431297 1995 ntBASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00588Q9Y4M8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 YBX1P10-201ENST00000444752 975 ntBASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 AC026471.5-201ENST00000615068 467 ntBASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00588Q9Y4M8 AL512408.1-201ENST00000569378 2000 ntBASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00588Q9Y4M8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 AL355355.2-201ENST00000442321 338 ntBASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 AL353708.3-201ENST00000610272 989 ntBASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 AC073912.3-201ENST00000624414 853 ntBASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00588Q9Y4M8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms