Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 AC092028.1-203ENST00000608262 953 ntBASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHTOPQ9Y3Y2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 TREX1-205ENST00000625293 1783 ntBASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 ATP5G2P3-201ENST00000429083 425 ntBASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHTOPQ9Y3Y2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 AL138781.2-201ENST00000617896 1843 ntBASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.13□□□□□ -0.15
CHTOPQ9Y3Y2 AC004987.1-201ENST00000428627 508 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms