Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 HLA-A-209ENST00000638375 975 ntBASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 AC092720.2-201ENST00000602388 1665 ntBASIC30.62■■■□□ 2.49
CDK11AQ9UQ88 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 PTPA-216ENST00000432651 857 ntTSL 2 BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 AC011298.2-201ENST00000617989 482 ntBASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 CLDN5-201ENST00000403084 2357 ntBASIC30.61■■■□□ 2.49
CDK11AQ9UQ88 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 INGX-201ENST00000359239 846 ntBASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 HMGA1P5-201ENST00000412453 271 ntBASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 AC004951.3-201ENST00000418645 1148 ntBASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 CYGB-204ENST00000589342 815 ntTSL 3 BASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 AC096733.2-201ENST00000609937 1394 ntBASIC30.6■■■□□ 2.49
CDK11AQ9UQ88 BID-203ENST00000399765 1879 ntTSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC30.59■■■□□ 2.49
CDK11AQ9UQ88 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDK11AQ9UQ88 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
CDK11AQ9UQ88 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 AK4P3-201ENST00000418260 669 ntBASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 AC008040.2-201ENST00000461049 708 ntBASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
CDK11AQ9UQ88 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 AF106564.1-201ENST00000607058 2553 ntBASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 AC063952.2-201ENST00000498792 1227 ntBASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 LINC01238-205ENST00000567549 1107 ntBASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 AC116562.4-202ENST00000641738 218 ntBASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.56■■■□□ 2.48
CDK11AQ9UQ88 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms