Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC28.45■■■□□ 2.15
SLC52A1Q9NWF4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 NMU-205ENST00000511469 756 ntTSL 3 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 AL023803.3-201ENST00000615559 522 ntBASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SLC52A1Q9NWF4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SLC52A1Q9NWF4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 COX11P1-201ENST00000489116 835 ntBASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SLC52A1Q9NWF4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 Z85996.1-201ENST00000494644 937 ntBASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC28.42■■■□□ 2.14
SLC52A1Q9NWF4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC52A1Q9NWF4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 AP000550.4-202ENST00000639755 178 ntBASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC28.4■■■□□ 2.14
SLC52A1Q9NWF4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 DBP-204ENST00000599385 709 ntTSL 3 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 AC141257.4-201ENST00000634557 245 ntBASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 AC136944.6-201ENST00000634818 245 ntBASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC52A1Q9NWF4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
SLC52A1Q9NWF4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 AC006128.1-201ENST00000624704 1661 ntBASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC28.38■■■□□ 2.13
SLC52A1Q9NWF4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms