Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 YBX1P10-201ENST00000444752 975 ntBASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 AL031432.5-201ENST00000641059 760 ntBASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 KRT8P17-201ENST00000453110 1448 ntBASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF408Q9H9D4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF408Q9H9D4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 AC096733.2-201ENST00000609937 1394 ntBASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 AC092338.2-201ENST00000568827 1415 ntBASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 AC246785.2-201ENST00000432512 513 ntBASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 KRT18P16-201ENST00000510337 1294 ntBASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF408Q9H9D4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 KRT18P38-201ENST00000449496 1282 ntBASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF408Q9H9D4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
ZNF408Q9H9D4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
ZNF408Q9H9D4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF408Q9H9D4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms