Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
VRTNQ9H8Y1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VRTNQ9H8Y1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 KRT16P5-201ENST00000455284 522 ntBASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VRTNQ9H8Y1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 AC073130.3-201ENST00000624389 2278 ntBASIC21.06■□□□□ 0.96
VRTNQ9H8Y1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 UBE2SP1-201ENST00000450587 669 ntBASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 AC004264.1-201ENST00000608354 794 ntBASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.05■□□□□ 0.96
VRTNQ9H8Y1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VRTNQ9H8Y1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 SLC25A24-204ENST00000569674 2357 ntBASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VRTNQ9H8Y1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms