Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 AC097493.4-201ENST00000641197 219 ntBASIC23.06■■□□□ 1.28
SH2D4AQ9H788 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 UNC93B2-201ENST00000285383 730 ntBASIC23.05■■□□□ 1.28
SH2D4AQ9H788 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 REXO1L10P-201ENST00000615707 1290 ntBASIC23.05■■□□□ 1.28
SH2D4AQ9H788 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.05■■□□□ 1.28
SH2D4AQ9H788 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 RBM17P1-201ENST00000453646 1190 ntBASIC23.04■■□□□ 1.28
SH2D4AQ9H788 KRT18P16-201ENST00000510337 1294 ntBASIC23.04■■□□□ 1.28
SH2D4AQ9H788 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SH2D4AQ9H788 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 TUBB8P6-201ENST00000436895 1288 ntBASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
SH2D4AQ9H788 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 AC116562.2-201ENST00000507042 360 ntBASIC23.02■■□□□ 1.28
SH2D4AQ9H788 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 AC012306.2-201ENST00000609350 630 ntBASIC23.02■■□□□ 1.28
SH2D4AQ9H788 AL031985.4-201ENST00000642138 673 ntBASIC23.02■■□□□ 1.28
SH2D4AQ9H788 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SH2D4AQ9H788 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
SH2D4AQ9H788 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH2D4AQ9H788 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SH2D4AQ9H788 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
SH2D4AQ9H788 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH2D4AQ9H788 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SH2D4AQ9H788 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms