Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.66■■□□□ 1.06
HIPK3Q9H422 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.66■■□□□ 1.06
HIPK3Q9H422 AC091390.4-202ENST00000476426 537 ntBASIC21.66■■□□□ 1.06
HIPK3Q9H422 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.66■■□□□ 1.06
HIPK3Q9H422 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 AC116562.4-202ENST00000641738 218 ntBASIC21.66■■□□□ 1.06
HIPK3Q9H422 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HIPK3Q9H422 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
HIPK3Q9H422 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIPK3Q9H422 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK3Q9H422 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK3Q9H422 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 AC011298.2-201ENST00000617989 482 ntBASIC21.65■■□□□ 1.06
HIPK3Q9H422 AL138966.2-201ENST00000621997 464 ntBASIC21.65■■□□□ 1.06
HIPK3Q9H422 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK3Q9H422 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.65■■□□□ 1.06
HIPK3Q9H422 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK3Q9H422 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIPK3Q9H422 RCC2P6-201ENST00000526625 1557 ntBASIC21.65■■□□□ 1.06
HIPK3Q9H422 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIPK3Q9H422 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
HIPK3Q9H422 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 AL031133.1-201ENST00000406807 723 ntBASIC21.64■■□□□ 1.05
HIPK3Q9H422 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HIPK3Q9H422 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.64■■□□□ 1.05
HIPK3Q9H422 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 CCR12P-201ENST00000446203 998 ntBASIC21.63■■□□□ 1.05
HIPK3Q9H422 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 AC018553.1-201ENST00000616682 1458 ntBASIC21.63■■□□□ 1.05
HIPK3Q9H422 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
HIPK3Q9H422 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIPK3Q9H422 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HIPK3Q9H422 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.62■■□□□ 1.05
HIPK3Q9H422 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 MFAP1P1-201ENST00000442257 1255 ntBASIC21.62■■□□□ 1.05
HIPK3Q9H422 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 YBX1P2-201ENST00000489612 999 ntBASIC21.62■■□□□ 1.05
HIPK3Q9H422 KRT18P56-201ENST00000507275 550 ntBASIC21.62■■□□□ 1.05
HIPK3Q9H422 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.62■■□□□ 1.05
HIPK3Q9H422 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.62■■□□□ 1.05
HIPK3Q9H422 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIPK3Q9H422 AC005229.4-201ENST00000610085 2198 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 LINC00565-201ENST00000562710 2331 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIPK3Q9H422 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.61■■□□□ 1.05
HIPK3Q9H422 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms