Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NUCKS1Q9H1E3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.39■■□□□ 1.02
NUCKS1Q9H1E3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 AL355802.2-201ENST00000402069 882 ntBASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NUCKS1Q9H1E3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.38■■□□□ 1.01
NUCKS1Q9H1E3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUCKS1Q9H1E3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 AC087289.5-201ENST00000586076 3175 ntBASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 AL138781.1-201ENST00000566567 1274 ntBASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 AL589743.5-201ENST00000616611 1050 ntBASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 PHGDH-210ENST00000641115 1638 ntBASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.36■■□□□ 1.01
NUCKS1Q9H1E3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 MKRN4P-201ENST00000444706 1521 ntBASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 SLC29A4P1-201ENST00000398760 971 ntBASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 AL512625.2-201ENST00000417533 625 ntBASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.35■■□□□ 1.01
NUCKS1Q9H1E3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms