Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM7Q9C029 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 AC116562.4-201ENST00000641316 2276 ntBASIC20.94■□□□□ 0.94
TRIM7Q9C029 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 GPX1P1-201ENST00000388829 606 ntBASIC20.94■□□□□ 0.94
TRIM7Q9C029 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.94■□□□□ 0.94
TRIM7Q9C029 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.94■□□□□ 0.94
TRIM7Q9C029 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM7Q9C029 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM7Q9C029 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 TREX1-205ENST00000625293 1783 ntBASIC20.93■□□□□ 0.94
TRIM7Q9C029 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 MIPEPP3-201ENST00000412105 444 ntBASIC20.93■□□□□ 0.94
TRIM7Q9C029 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.93■□□□□ 0.94
TRIM7Q9C029 AC006970.2-201ENST00000450065 779 ntBASIC20.93■□□□□ 0.94
TRIM7Q9C029 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM7Q9C029 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 AIRN-201ENST00000601203 4374 ntBASIC20.93■□□□□ 0.94
TRIM7Q9C029 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM7Q9C029 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.92■□□□□ 0.94
TRIM7Q9C029 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM7Q9C029 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM7Q9C029 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM7Q9C029 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM7Q9C029 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 AL121832.2-201ENST00000610979 668 ntBASIC20.91■□□□□ 0.94
TRIM7Q9C029 AC092666.2-201ENST00000613287 246 ntBASIC20.91■□□□□ 0.94
TRIM7Q9C029 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM7Q9C029 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM7Q9C029 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM7Q9C029 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM7Q9C029 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM7Q9C029 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM7Q9C029 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM7Q9C029 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM7Q9C029 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM7Q9C029 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms