Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS2Q99743 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS2Q99743 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS2Q99743 OR10C1-204ENST00000622521 1039 ntBASIC19.29■□□□□ 0.68
NPAS2Q99743 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS2Q99743 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS2Q99743 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS2Q99743 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS2Q99743 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS2Q99743 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS2Q99743 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.28■□□□□ 0.68
NPAS2Q99743 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 KRT8P36-201ENST00000489121 1440 ntBASIC19.28■□□□□ 0.68
NPAS2Q99743 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPAS2Q99743 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NPAS2Q99743 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS2Q99743 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.28■□□□□ 0.68
NPAS2Q99743 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 AL591742.1-201ENST00000604433 565 ntBASIC19.28■□□□□ 0.68
NPAS2Q99743 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NPAS2Q99743 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.28■□□□□ 0.68
NPAS2Q99743 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPAS2Q99743 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAS2Q99743 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS2Q99743 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
NPAS2Q99743 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NPAS2Q99743 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS2Q99743 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 AC091799.1-201ENST00000422823 811 ntBASIC19.27■□□□□ 0.68
NPAS2Q99743 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS2Q99743 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.27■□□□□ 0.68
NPAS2Q99743 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS2Q99743 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPAS2Q99743 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.27■□□□□ 0.68
NPAS2Q99743 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS2Q99743 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS2Q99743 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS2Q99743 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NPAS2Q99743 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPAS2Q99743 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS2Q99743 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NPAS2Q99743 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NPAS2Q99743 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 MIPEPP3-201ENST00000412105 444 ntBASIC19.26■□□□□ 0.67
NPAS2Q99743 AL512625.2-201ENST00000417533 625 ntBASIC19.26■□□□□ 0.67
NPAS2Q99743 AC069152.1-201ENST00000438030 544 ntBASIC19.26■□□□□ 0.67
NPAS2Q99743 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS2Q99743 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.26■□□□□ 0.67
NPAS2Q99743 AL162412.1-201ENST00000567129 965 ntBASIC19.26■□□□□ 0.67
NPAS2Q99743 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS2Q99743 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NPAS2Q99743 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.26■□□□□ 0.67
NPAS2Q99743 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NPAS2Q99743 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NPAS2Q99743 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPAS2Q99743 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.26■□□□□ 0.67
NPAS2Q99743 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms