Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PHGDH-210ENST00000641115 1638 ntBASIC16.56■□□□□ 0.24
CCL13Q99616 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL13Q99616 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CCL13Q99616 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL13Q99616 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL13Q99616 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL13Q99616 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL13Q99616 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL13Q99616 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL13Q99616 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.56■□□□□ 0.24
CCL13Q99616 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL13Q99616 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL13Q99616 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL13Q99616 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.55■□□□□ 0.24
CCL13Q99616 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL13Q99616 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CCL13Q99616 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL13Q99616 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.55■□□□□ 0.24
CCL13Q99616 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL13Q99616 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCL13Q99616 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.55■□□□□ 0.24
CCL13Q99616 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.54■□□□□ 0.24
CCL13Q99616 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.54■□□□□ 0.24
CCL13Q99616 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.54■□□□□ 0.24
CCL13Q99616 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.54■□□□□ 0.24
CCL13Q99616 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CCL13Q99616 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 AC233263.1-201ENST00000578059 224 ntBASIC16.54■□□□□ 0.24
CCL13Q99616 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 AC018553.1-201ENST00000616682 1458 ntBASIC16.54■□□□□ 0.24
CCL13Q99616 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.54■□□□□ 0.24
CCL13Q99616 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCL13Q99616 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCL13Q99616 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CCL13Q99616 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL13Q99616 AC128676.1-201ENST00000454392 318 ntBASIC16.53■□□□□ 0.24
CCL13Q99616 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL13Q99616 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.53■□□□□ 0.24
CCL13Q99616 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.53■□□□□ 0.24
CCL13Q99616 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL13Q99616 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 AC073648.6-201ENST00000641589 218 ntBASIC16.53■□□□□ 0.24
CCL13Q99616 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL13Q99616 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCL13Q99616 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL13Q99616 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCL13Q99616 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL13Q99616 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.52■□□□□ 0.24
CCL13Q99616 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL13Q99616 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms