Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.78■□□□□ 0.76
NDNQ99608 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.78■□□□□ 0.76
NDNQ99608 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.78■□□□□ 0.76
NDNQ99608 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDNQ99608 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NDNQ99608 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDNQ99608 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDNQ99608 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDNQ99608 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NDNQ99608 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.78■□□□□ 0.76
NDNQ99608 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.77■□□□□ 0.76
NDNQ99608 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.77■□□□□ 0.76
NDNQ99608 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NDNQ99608 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 AC116562.4-201ENST00000641316 2276 ntBASIC19.77■□□□□ 0.76
NDNQ99608 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 AF201337.1-201ENST00000520239 748 ntBASIC19.77■□□□□ 0.76
NDNQ99608 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.77■□□□□ 0.76
NDNQ99608 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
NDNQ99608 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDNQ99608 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.77■□□□□ 0.76
NDNQ99608 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
NDNQ99608 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
NDNQ99608 KRT16P6-202ENST00000425692 1426 ntBASIC19.76■□□□□ 0.75
NDNQ99608 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 AC018445.3-201ENST00000624177 1945 ntBASIC19.76■□□□□ 0.75
NDNQ99608 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NDNQ99608 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NDNQ99608 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NDNQ99608 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.76■□□□□ 0.75
NDNQ99608 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
NDNQ99608 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.76■□□□□ 0.75
NDNQ99608 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.76■□□□□ 0.75
NDNQ99608 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.76■□□□□ 0.75
NDNQ99608 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.76■□□□□ 0.75
NDNQ99608 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDNQ99608 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.76■□□□□ 0.75
NDNQ99608 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NDNQ99608 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 BX276092.2-201ENST00000417668 665 ntBASIC19.75■□□□□ 0.75
NDNQ99608 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
NDNQ99608 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDNQ99608 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.75■□□□□ 0.75
NDNQ99608 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 HLA-G-202ENST00000376815 851 ntBASIC19.74■□□□□ 0.75
NDNQ99608 HLA-G-203ENST00000376818 1127 ntBASIC19.74■□□□□ 0.75
NDNQ99608 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.74■□□□□ 0.75
NDNQ99608 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.74■□□□□ 0.75
NDNQ99608 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NDNQ99608 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NDNQ99608 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.74■□□□□ 0.75
NDNQ99608 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.74■□□□□ 0.75
NDNQ99608 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.74■□□□□ 0.75
NDNQ99608 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDNQ99608 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.73■□□□□ 0.75
NDNQ99608 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms