Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 AL391422.3-201ENST00000603791 2761 ntBASIC17.9■□□□□ 0.46
SPENQ96T58 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 AC091390.4-202ENST00000476426 537 ntBASIC17.9■□□□□ 0.46
SPENQ96T58 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.9■□□□□ 0.46
SPENQ96T58 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
SPENQ96T58 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SPENQ96T58 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 AC093458.2-201ENST00000623150 629 ntBASIC17.9■□□□□ 0.46
SPENQ96T58 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 AC004980.1-204ENST00000429707 299 ntBASIC17.9■□□□□ 0.46
SPENQ96T58 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.9■□□□□ 0.46
SPENQ96T58 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.9■□□□□ 0.46
SPENQ96T58 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SPENQ96T58 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SPENQ96T58 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SPENQ96T58 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.89■□□□□ 0.45
SPENQ96T58 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 TPM4P1-201ENST00000436100 807 ntBASIC17.89■□□□□ 0.45
SPENQ96T58 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.89■□□□□ 0.45
SPENQ96T58 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.89■□□□□ 0.45
SPENQ96T58 AL117328.2-201ENST00000624617 1940 ntBASIC17.89■□□□□ 0.45
SPENQ96T58 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SPENQ96T58 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.89■□□□□ 0.45
SPENQ96T58 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.89■□□□□ 0.45
SPENQ96T58 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.89■□□□□ 0.45
SPENQ96T58 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.89■□□□□ 0.45
SPENQ96T58 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.89■□□□□ 0.45
SPENQ96T58 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SPENQ96T58 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.88■□□□□ 0.45
SPENQ96T58 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.88■□□□□ 0.45
SPENQ96T58 FAM86EP-206ENST00000510506 987 ntBASIC17.88■□□□□ 0.45
SPENQ96T58 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.88■□□□□ 0.45
SPENQ96T58 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPENQ96T58 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.88■□□□□ 0.45
SPENQ96T58 AP000550.4-202ENST00000639755 178 ntBASIC17.88■□□□□ 0.45
SPENQ96T58 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SPENQ96T58 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SPENQ96T58 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 AC091076.1-201ENST00000610741 619 ntBASIC17.88■□□□□ 0.45
SPENQ96T58 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SPENQ96T58 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.88■□□□□ 0.45
SPENQ96T58 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.88■□□□□ 0.45
SPENQ96T58 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SPENQ96T58 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SPENQ96T58 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.88■□□□□ 0.45
SPENQ96T58 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 AL450487.1-201ENST00000426799 995 ntBASIC17.87■□□□□ 0.45
SPENQ96T58 AC008040.2-201ENST00000461049 708 ntBASIC17.87■□□□□ 0.45
SPENQ96T58 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.87■□□□□ 0.45
SPENQ96T58 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.87■□□□□ 0.45
SPENQ96T58 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 AC092667.1-201ENST00000434301 2586 ntBASIC17.87■□□□□ 0.45
SPENQ96T58 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SPENQ96T58 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SPENQ96T58 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms