Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 YBX1P2-201ENST00000489612 999 ntBASIC19.35■□□□□ 0.69
PCDH15Q96QU1 KRT18P16-201ENST00000510337 1294 ntBASIC19.35■□□□□ 0.69
PCDH15Q96QU1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH15Q96QU1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 AC006128.1-201ENST00000624704 1661 ntBASIC19.34■□□□□ 0.69
PCDH15Q96QU1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 AC096733.2-201ENST00000609937 1394 ntBASIC19.34■□□□□ 0.69
PCDH15Q96QU1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH15Q96QU1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDH15Q96QU1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH15Q96QU1 AC121338.2-201ENST00000622535 1744 ntBASIC19.33■□□□□ 0.68
PCDH15Q96QU1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AC091076.1-201ENST00000610741 619 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AL138966.2-201ENST00000621997 464 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AC116351.2-201ENST00000606540 1585 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AC091390.4-202ENST00000476426 537 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AL121894.2-201ENST00000602977 491 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 AC005229.4-201ENST00000610085 2198 ntBASIC19.32■□□□□ 0.68
PCDH15Q96QU1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 TFP1-202ENST00000475455 1573 ntBASIC19.31■□□□□ 0.68
PCDH15Q96QU1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 FP700111.2-201ENST00000619190 1892 ntBASIC19.31■□□□□ 0.68
PCDH15Q96QU1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH15Q96QU1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 DUSP5P1-201ENST00000441325 1139 ntBASIC19.3■□□□□ 0.68
PCDH15Q96QU1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH15Q96QU1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms