Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 AC098934.4-201ENST00000564127 592 ntBASIC18.65■□□□□ 0.58
COL21A1Q96P44 C2orf69P4-201ENST00000565394 541 ntBASIC18.65■□□□□ 0.58
COL21A1Q96P44 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL21A1Q96P44 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL21A1Q96P44 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
COL21A1Q96P44 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL21A1Q96P44 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL21A1Q96P44 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 AC097658.1-201ENST00000475555 843 ntBASIC18.64■□□□□ 0.57
COL21A1Q96P44 AC091874.3-201ENST00000512672 1195 ntBASIC18.64■□□□□ 0.57
COL21A1Q96P44 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.64■□□□□ 0.57
COL21A1Q96P44 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.64■□□□□ 0.57
COL21A1Q96P44 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL21A1Q96P44 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL21A1Q96P44 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL21A1Q96P44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 AC116562.4-201ENST00000641316 2276 ntBASIC18.62■□□□□ 0.57
COL21A1Q96P44 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 AL158211.5-201ENST00000623583 2518 ntBASIC18.62■□□□□ 0.57
COL21A1Q96P44 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 TMEM179-206ENST00000616017 1645 ntBASIC18.62■□□□□ 0.57
COL21A1Q96P44 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL21A1Q96P44 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL21A1Q96P44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL21A1Q96P44 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
COL21A1Q96P44 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms