Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC092118.2-201ENST00000613495 667 ntBASIC20.9■□□□□ 0.94
TRIM11Q96F44 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 AC116562.4-201ENST00000641316 2276 ntBASIC20.9■□□□□ 0.94
TRIM11Q96F44 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TRIM11Q96F44 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM11Q96F44 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM11Q96F44 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TRIM11Q96F44 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM11Q96F44 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRIM11Q96F44 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM11Q96F44 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM11Q96F44 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 AC083906.2-201ENST00000511578 360 ntBASIC20.89■□□□□ 0.93
TRIM11Q96F44 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM11Q96F44 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM11Q96F44 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM11Q96F44 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 SLC29A4P1-201ENST00000398760 971 ntBASIC20.88■□□□□ 0.93
TRIM11Q96F44 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM11Q96F44 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM11Q96F44 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.87■□□□□ 0.93
TRIM11Q96F44 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 AC005829.2-201ENST00000571422 1056 ntBASIC20.87■□□□□ 0.93
TRIM11Q96F44 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 AC116351.2-201ENST00000606540 1585 ntBASIC20.87■□□□□ 0.93
TRIM11Q96F44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM11Q96F44 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM11Q96F44 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 DUSP5P2-201ENST00000426873 1033 ntBASIC20.86■□□□□ 0.93
TRIM11Q96F44 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.86■□□□□ 0.93
TRIM11Q96F44 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 AC018553.1-201ENST00000616682 1458 ntBASIC20.86■□□□□ 0.93
TRIM11Q96F44 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM11Q96F44 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM11Q96F44 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM11Q96F44 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM11Q96F44 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM11Q96F44 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM11Q96F44 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM11Q96F44 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM11Q96F44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM11Q96F44 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM11Q96F44 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM11Q96F44 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms