Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF31Q96EP0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF31Q96EP0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RNF31Q96EP0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 AC133681.1-201ENST00000465482 601 ntBASIC19.02■□□□□ 0.64
RNF31Q96EP0 REXO1L12P-201ENST00000622156 912 ntBASIC19.02■□□□□ 0.64
RNF31Q96EP0 AC073912.3-201ENST00000624414 853 ntBASIC19.02■□□□□ 0.64
RNF31Q96EP0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF31Q96EP0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF31Q96EP0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF31Q96EP0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF31Q96EP0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF31Q96EP0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RNF31Q96EP0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 DPP3P2-201ENST00000416030 1696 ntBASIC19.01■□□□□ 0.63
RNF31Q96EP0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 KRT18P21-201ENST00000515767 1272 ntBASIC19.01■□□□□ 0.63
RNF31Q96EP0 AL355075.4-201ENST00000554988 638 ntBASIC19.01■□□□□ 0.63
RNF31Q96EP0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF31Q96EP0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF31Q96EP0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19■□□□□ 0.63
RNF31Q96EP0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF31Q96EP0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF31Q96EP0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF31Q96EP0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 AC012618.2-201ENST00000428058 849 ntBASIC19■□□□□ 0.63
RNF31Q96EP0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19■□□□□ 0.63
RNF31Q96EP0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
RNF31Q96EP0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF31Q96EP0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 PTBP1P-201ENST00000554374 1601 ntBASIC19■□□□□ 0.63
RNF31Q96EP0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19■□□□□ 0.63
RNF31Q96EP0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF31Q96EP0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF31Q96EP0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19■□□□□ 0.63
RNF31Q96EP0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 BX088651.1-201ENST00000540551 451 ntBASIC18.99■□□□□ 0.63
RNF31Q96EP0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF31Q96EP0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF31Q96EP0 HTR7P1-201ENST00000538670 1336 ntBASIC18.99■□□□□ 0.63
RNF31Q96EP0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms