Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCAMP4Q969E2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCAMP4Q969E2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCAMP4Q969E2 NBPF21P-201ENST00000425093 1451 ntBASIC19.66■□□□□ 0.74
SCAMP4Q969E2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCAMP4Q969E2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 UBE2SP1-201ENST00000450587 669 ntBASIC19.65■□□□□ 0.74
SCAMP4Q969E2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.65■□□□□ 0.74
SCAMP4Q969E2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCAMP4Q969E2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCAMP4Q969E2 TCF3P1-201ENST00000423021 1937 ntBASIC19.64■□□□□ 0.74
SCAMP4Q969E2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCAMP4Q969E2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCAMP4Q969E2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCAMP4Q969E2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.64■□□□□ 0.74
SCAMP4Q969E2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCAMP4Q969E2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
SCAMP4Q969E2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 AP006587.1-201ENST00000534129 1502 ntBASIC19.62■□□□□ 0.73
SCAMP4Q969E2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.62■□□□□ 0.73
SCAMP4Q969E2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SCAMP4Q969E2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCAMP4Q969E2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCAMP4Q969E2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCAMP4Q969E2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SCAMP4Q969E2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms