Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 IKBKGP1-201ENST00000612193 1073 ntBASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 AC231657.2-201ENST00000624556 255 ntBASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 AC092437.1-201ENST00000624794 1048 ntBASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RTN4IP1Q8WWV3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 AL137784.2-201ENST00000607332 1000 ntBASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 AC020763.4-201ENST00000623414 4170 ntBASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RTN4IP1Q8WWV3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTN4IP1Q8WWV3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 AC007322.1-201ENST00000426983 750 ntBASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 AC016405.3-201ENST00000607710 860 ntBASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 AC068338.2-201ENST00000563278 1430 ntBASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTN4IP1Q8WWV3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 Z82202.1-201ENST00000623446 1880 ntBASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 AC004911.1-201ENST00000416316 871 ntBASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RTN4IP1Q8WWV3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms