Protein–RNA interactions for Protein: Q8WUH2

TGFBRAP1, Transforming growth factor-beta receptor-associated protein 1, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1Q8WUH2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TGFBRAP1Q8WUH2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 KRT18P16-201ENST00000510337 1294 ntBASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 PKD1P6-201ENST00000343738 4769 ntBASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 KRT16P1-201ENST00000399124 1418 ntBASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 AL512408.1-201ENST00000569378 2000 ntBASIC23.49■■□□□ 1.35
TGFBRAP1Q8WUH2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 RBM17P1-201ENST00000453646 1190 ntBASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.48■■□□□ 1.35
TGFBRAP1Q8WUH2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 AP005212.1-201ENST00000581547 1997 ntBASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 TUBB8P6-201ENST00000436895 1288 ntBASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 AC079598.2-202ENST00000546624 1451 ntBASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TGFBRAP1Q8WUH2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TGFBRAP1Q8WUH2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TGFBRAP1Q8WUH2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TGFBRAP1Q8WUH2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 MMP23A-201ENST00000234610 1017 ntBASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 AP000525.1-201ENST00000608286 694 ntBASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 FEM1AP1-201ENST00000431297 1995 ntBASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.45■■□□□ 1.34
TGFBRAP1Q8WUH2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TGFBRAP1Q8WUH2 AL391422.3-201ENST00000603791 2761 ntBASIC23.44■■□□□ 1.34
TGFBRAP1Q8WUH2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TGFBRAP1Q8WUH2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
TGFBRAP1Q8WUH2 AC116562.2-201ENST00000507042 360 ntBASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms