Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC2Q8TAQ2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
SMARCC2Q8TAQ2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 KRT18P29-201ENST00000397031 1267 ntBASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 UNC93B4-201ENST00000505679 747 ntBASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 SOX15-203ENST00000570788 1093 ntBASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 ITM2C-210ENST00000620962 501 ntBASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC2Q8TAQ2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 AC006058.3-201ENST00000606217 1069 ntBASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC2Q8TAQ2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AC116562.4-201ENST00000641316 2276 ntBASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AC008403.3-201ENST00000598924 454 ntBASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 AP001271.2-201ENST00000624018 1556 ntBASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
SMARCC2Q8TAQ2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 AL390719.1-204ENST00000412397 1219 ntBASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
SMARCC2Q8TAQ2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms