Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 PNMA6B-201ENST00000538162 1200 ntBASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 AC060766.5-201ENST00000590539 871 ntBASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 AC124283.5-201ENST00000624661 1809 ntBASIC20.4■□□□□ 0.86
PCDH19Q8TAB3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDH19Q8TAB3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH19Q8TAB3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PCDH19Q8TAB3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.39■□□□□ 0.86
PCDH19Q8TAB3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 FAM201B-201ENST00000458407 597 ntBASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH19Q8TAB3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 AC116562.4-201ENST00000641316 2276 ntBASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PCDH19Q8TAB3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 RPS2P52-201ENST00000469610 820 ntBASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 TFP1-202ENST00000475455 1573 ntBASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH19Q8TAB3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms