Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 AC098934.4-201ENST00000564127 592 ntBASIC18.49■□□□□ 0.55
NUP43Q8NFH3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP43Q8NFH3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AC073210.2-201ENST00000430369 194 ntBASIC18.48■□□□□ 0.55
NUP43Q8NFH3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AC104771.1-201ENST00000603335 964 ntBASIC18.48■□□□□ 0.55
NUP43Q8NFH3 AC006557.6-201ENST00000623071 864 ntBASIC18.48■□□□□ 0.55
NUP43Q8NFH3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP43Q8NFH3 TREX1-205ENST00000625293 1783 ntBASIC18.47■□□□□ 0.55
NUP43Q8NFH3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NUP43Q8NFH3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 HLA-B-256ENST00000639848 1089 ntBASIC18.46■□□□□ 0.55
NUP43Q8NFH3 AC133041.1-202ENST00000642053 222 ntBASIC18.46■□□□□ 0.55
NUP43Q8NFH3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NUP43Q8NFH3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms