Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.41■■□□□ 1.5
RTL9Q8NET4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTL9Q8NET4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RTL9Q8NET4 DGCR10-201ENST00000609839 495 ntBASIC24.4■■□□□ 1.5
RTL9Q8NET4 AC092865.7-201ENST00000641832 219 ntBASIC24.4■■□□□ 1.5
RTL9Q8NET4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTL9Q8NET4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.39■■□□□ 1.5
RTL9Q8NET4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.39■■□□□ 1.5
RTL9Q8NET4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RTL9Q8NET4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.39■■□□□ 1.5
RTL9Q8NET4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTL9Q8NET4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
RTL9Q8NET4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 FSCN1P1-201ENST00000568912 1481 ntBASIC24.38■■□□□ 1.49
RTL9Q8NET4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 MIR1238-201ENST00000408483 83 ntBASIC24.38■■□□□ 1.49
RTL9Q8NET4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.38■■□□□ 1.49
RTL9Q8NET4 B3GAT3P1-201ENST00000471720 806 ntBASIC24.38■■□□□ 1.49
RTL9Q8NET4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
RTL9Q8NET4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
RTL9Q8NET4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTL9Q8NET4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.37■■□□□ 1.49
RTL9Q8NET4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTL9Q8NET4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 AC005521.1-201ENST00000393351 872 ntBASIC24.36■■□□□ 1.49
RTL9Q8NET4 AL390955.1-201ENST00000428694 934 ntBASIC24.36■■□□□ 1.49
RTL9Q8NET4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 AP005242.2-201ENST00000580065 1175 ntBASIC24.36■■□□□ 1.49
RTL9Q8NET4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.36■■□□□ 1.49
RTL9Q8NET4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTL9Q8NET4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RTL9Q8NET4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTL9Q8NET4 TMEM179-206ENST00000616017 1645 ntBASIC24.35■■□□□ 1.49
RTL9Q8NET4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTL9Q8NET4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTL9Q8NET4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTL9Q8NET4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.35■■□□□ 1.49
RTL9Q8NET4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTL9Q8NET4 AC010947.1-201ENST00000623454 693 ntBASIC24.35■■□□□ 1.49
RTL9Q8NET4 HLA-A-209ENST00000638375 975 ntBASIC24.35■■□□□ 1.49
RTL9Q8NET4 AC007375.3-201ENST00000600936 2314 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms