Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 LETM1P2-201ENST00000597330 2178 ntBASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 AC124283.5-201ENST00000624661 1809 ntBASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 AC026471.1-201ENST00000564629 3026 ntBASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.6■□□□□ 0.57
SIMC1Q8NDZ2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIMC1Q8NDZ2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIMC1Q8NDZ2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIMC1Q8NDZ2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.58■□□□□ 0.57
SIMC1Q8NDZ2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIMC1Q8NDZ2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.58■□□□□ 0.57
SIMC1Q8NDZ2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 PNMA6B-201ENST00000538162 1200 ntBASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 AC005829.2-201ENST00000571422 1056 ntBASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 HLA-B-256ENST00000639848 1089 ntBASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIMC1Q8NDZ2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 AC060766.5-201ENST00000590539 871 ntBASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.57■□□□□ 0.56
SIMC1Q8NDZ2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SIMC1Q8NDZ2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms