Protein–RNA interactions for Protein: Q8N9Z9

LMNTD1, Lamin tail domain-containing protein 1, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1Q8N9Z9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 KRT17P3-201ENST00000420566 1262 ntBASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 ITM2C-210ENST00000620962 501 ntBASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 AC018553.1-201ENST00000616682 1458 ntBASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.2■□□□□ 0.66
LMNTD1Q8N9Z9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 AC098590.1-201ENST00000468126 897 ntBASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 AL023875.1-201ENST00000640777 796 ntBASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 AC125437.2-201ENST00000625180 2167 ntBASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LMNTD1Q8N9Z9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 PHGDH-210ENST00000641115 1638 ntBASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 MTDHP1-201ENST00000605323 784 ntBASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.18■□□□□ 0.66
LMNTD1Q8N9Z9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LMNTD1Q8N9Z9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
LMNTD1Q8N9Z9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms