Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 AC008550.1-201ENST00000511500 884 ntBASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 YBX1P10-201ENST00000444752 975 ntBASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 KRT18P16-201ENST00000510337 1294 ntBASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 Z99916.2-201ENST00000604037 246 ntBASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.68■□□□□ 0.58
ARHGEF39Q8N4T4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 AC093827.2-201ENST00000512654 315 ntBASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 RARRES2P10-201ENST00000564312 460 ntBASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ARHGEF39Q8N4T4 AC112907.3-201ENST00000577781 2400 ntBASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 AP006294.2-201ENST00000641667 209 ntBASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ARHGEF39Q8N4T4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms